Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col15a1O35206 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Col15a1O35206 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Col15a1O35206 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col15a1O35206 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Col15a1O35206 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col15a1O35206 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Col15a1O35206 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col15a1O35206 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col15a1O35206 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col15a1O35206 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col15a1O35206 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col15a1O35206 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Col15a1O35206 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col15a1O35206 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col15a1O35206 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col15a1O35206 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col15a1O35206 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col15a1O35206 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col15a1O35206 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col15a1O35206 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC19.03■□□□□ 0.64
Col15a1O35206 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col15a1O35206 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC19.03■□□□□ 0.64
Col15a1O35206 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Col15a1O35206 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC19.03■□□□□ 0.64
Col15a1O35206 Gm45384-201ENSMUST00000210451 277 ntBASIC19.03■□□□□ 0.64
Col15a1O35206 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col15a1O35206 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col15a1O35206 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col15a1O35206 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC19.03■□□□□ 0.64
Col15a1O35206 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col15a1O35206 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col15a1O35206 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col15a1O35206 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col15a1O35206 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col15a1O35206 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col15a1O35206 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC19.02■□□□□ 0.64
Col15a1O35206 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC19.02■□□□□ 0.64
Col15a1O35206 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col15a1O35206 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col15a1O35206 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col15a1O35206 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col15a1O35206 Gm15823-201ENSMUST00000064305 670 ntBASIC19.02■□□□□ 0.64
Col15a1O35206 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col15a1O35206 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col15a1O35206 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col15a1O35206 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col15a1O35206 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col15a1O35206 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col15a1O35206 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col15a1O35206 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col15a1O35206 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.01■□□□□ 0.63
Col15a1O35206 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Col15a1O35206 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col15a1O35206 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Col15a1O35206 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Col15a1O35206 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col15a1O35206 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col15a1O35206 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col15a1O35206 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC19.01■□□□□ 0.63
Col15a1O35206 Gm25857-201ENSMUST00000082788 129 ntBASIC19.01■□□□□ 0.63
Col15a1O35206 Mir125a-201ENSMUST00000083545 68 ntBASIC19.01■□□□□ 0.63
Col15a1O35206 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col15a1O35206 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Col15a1O35206 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col15a1O35206 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col15a1O35206 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Col15a1O35206 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Col15a1O35206 Gm9115-201ENSMUST00000120192 1348 ntBASIC19.01■□□□□ 0.63
Col15a1O35206 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col15a1O35206 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col15a1O35206 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Col15a1O35206 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col15a1O35206 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Col15a1O35206 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col15a1O35206 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC19■□□□□ 0.63
Col15a1O35206 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col15a1O35206 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col15a1O35206 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col15a1O35206 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Col15a1O35206 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Col15a1O35206 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col15a1O35206 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC19■□□□□ 0.63
Col15a1O35206 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC19■□□□□ 0.63
Col15a1O35206 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC19■□□□□ 0.63
Col15a1O35206 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col15a1O35206 Gm9797-201ENSMUST00000052902 613 ntBASIC19■□□□□ 0.63
Col15a1O35206 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col15a1O35206 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col15a1O35206 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Col15a1O35206 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col15a1O35206 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col15a1O35206 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col15a1O35206 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col15a1O35206 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col15a1O35206 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col15a1O35206 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col15a1O35206 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col15a1O35206 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col15a1O35206 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms