Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cx3cl1O35188 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cx3cl1O35188 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cx3cl1O35188 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cl1O35188 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.09□□□□□ -0.15
Cx3cl1O35188 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cl1O35188 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cl1O35188 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cx3cl1O35188 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.08□□□□□ -0.15
Cx3cl1O35188 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cx3cl1O35188 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Cx3cl1O35188 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Cx3cl1O35188 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Gm13597-201ENSMUST00000121239 375 ntBASIC14.08□□□□□ -0.16
Cx3cl1O35188 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Gm5264-201ENSMUST00000190584 848 ntBASIC14.08□□□□□ -0.16
Cx3cl1O35188 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.08□□□□□ -0.16
Cx3cl1O35188 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.08□□□□□ -0.16
Cx3cl1O35188 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Cx3cl1O35188 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.08□□□□□ -0.16
Cx3cl1O35188 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cl1O35188 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cx3cl1O35188 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cl1O35188 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Mir8117-201ENSMUST00000184773 107 ntBASIC14.07□□□□□ -0.16
Cx3cl1O35188 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.07□□□□□ -0.16
Cx3cl1O35188 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cx3cl1O35188 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms