Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac1O09106 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac1O09106 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac1O09106 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.84■□□□□ 0.45
Hdac1O09106 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Hdac1O09106 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac1O09106 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac1O09106 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Hdac1O09106 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.84■□□□□ 0.45
Hdac1O09106 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.84■□□□□ 0.45
Hdac1O09106 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac1O09106 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac1O09106 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.84■□□□□ 0.45
Hdac1O09106 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac1O09106 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac1O09106 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.84■□□□□ 0.45
Hdac1O09106 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac1O09106 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac1O09106 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac1O09106 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac1O09106 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac1O09106 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac1O09106 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac1O09106 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac1O09106 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hdac1O09106 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hdac1O09106 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hdac1O09106 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hdac1O09106 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hdac1O09106 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hdac1O09106 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Hdac1O09106 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hdac1O09106 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac1O09106 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac1O09106 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac1O09106 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.83■□□□□ 0.44
Hdac1O09106 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.83■□□□□ 0.44
Hdac1O09106 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Hdac1O09106 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Hdac1O09106 Gm33142-201ENSMUST00000193913 867 ntBASIC17.83■□□□□ 0.44
Hdac1O09106 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.83■□□□□ 0.44
Hdac1O09106 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.83■□□□□ 0.44
Hdac1O09106 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac1O09106 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac1O09106 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC17.83■□□□□ 0.44
Hdac1O09106 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac1O09106 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC17.83■□□□□ 0.44
Hdac1O09106 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac1O09106 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac1O09106 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac1O09106 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Hdac1O09106 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hdac1O09106 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac1O09106 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac1O09106 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac1O09106 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.82■□□□□ 0.44
Hdac1O09106 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac1O09106 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac1O09106 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac1O09106 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac1O09106 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac1O09106 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac1O09106 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac1O09106 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac1O09106 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Hdac1O09106 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.82■□□□□ 0.44
Hdac1O09106 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac1O09106 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac1O09106 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac1O09106 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac1O09106 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC17.82■□□□□ 0.44
Hdac1O09106 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac1O09106 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Hdac1O09106 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.82■□□□□ 0.44
Hdac1O09106 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac1O09106 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac1O09106 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Hdac1O09106 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Hdac1O09106 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Hdac1O09106 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac1O09106 Gm4535-201ENSMUST00000182274 558 ntBASIC17.81■□□□□ 0.44
Hdac1O09106 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.81■□□□□ 0.44
Hdac1O09106 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac1O09106 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac1O09106 Gm10355-201ENSMUST00000097146 517 ntBASIC17.81■□□□□ 0.44
Hdac1O09106 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Hdac1O09106 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Hdac1O09106 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Hdac1O09106 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac1O09106 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Hdac1O09106 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.8■□□□□ 0.44
Hdac1O09106 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac1O09106 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac1O09106 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac1O09106 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac1O09106 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac1O09106 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac1O09106 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac1O09106 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Hdac1O09106 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms