Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NpcdF8VQB8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NpcdF8VQB8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NpcdF8VQB8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NpcdF8VQB8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NpcdF8VQB8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NpcdF8VQB8 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.98■□□□□ 0.47
NpcdF8VQB8 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.98■□□□□ 0.47
NpcdF8VQB8 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.98■□□□□ 0.47
NpcdF8VQB8 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NpcdF8VQB8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NpcdF8VQB8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NpcdF8VQB8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NpcdF8VQB8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NpcdF8VQB8 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NpcdF8VQB8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.97■□□□□ 0.47
NpcdF8VQB8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
NpcdF8VQB8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NpcdF8VQB8 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.97■□□□□ 0.47
NpcdF8VQB8 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.97■□□□□ 0.47
NpcdF8VQB8 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NpcdF8VQB8 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NpcdF8VQB8 Gm17150-201ENSMUST00000165577 381 ntBASIC17.97■□□□□ 0.47
NpcdF8VQB8 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC17.97■□□□□ 0.47
NpcdF8VQB8 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC17.97■□□□□ 0.47
NpcdF8VQB8 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.97■□□□□ 0.47
NpcdF8VQB8 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
NpcdF8VQB8 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NpcdF8VQB8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.97■□□□□ 0.47
NpcdF8VQB8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NpcdF8VQB8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NpcdF8VQB8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NpcdF8VQB8 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.97■□□□□ 0.47
NpcdF8VQB8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NpcdF8VQB8 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NpcdF8VQB8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NpcdF8VQB8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NpcdF8VQB8 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NpcdF8VQB8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NpcdF8VQB8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
NpcdF8VQB8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NpcdF8VQB8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Gm22189-201ENSMUST00000103822 86 ntBASIC17.96■□□□□ 0.47
NpcdF8VQB8 Gm24543-201ENSMUST00000103867 82 ntBASIC17.96■□□□□ 0.47
NpcdF8VQB8 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NpcdF8VQB8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
NpcdF8VQB8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
NpcdF8VQB8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NpcdF8VQB8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NpcdF8VQB8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NpcdF8VQB8 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
NpcdF8VQB8 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NpcdF8VQB8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NpcdF8VQB8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NpcdF8VQB8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NpcdF8VQB8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
NpcdF8VQB8 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NpcdF8VQB8 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NpcdF8VQB8 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
NpcdF8VQB8 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
NpcdF8VQB8 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NpcdF8VQB8 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.95■□□□□ 0.46
NpcdF8VQB8 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.95■□□□□ 0.46
NpcdF8VQB8 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NpcdF8VQB8 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NpcdF8VQB8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NpcdF8VQB8 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NpcdF8VQB8 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
NpcdF8VQB8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NpcdF8VQB8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NpcdF8VQB8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms