Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Col6a3E9PWQ3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.73□□□□□ -0.05
Col6a3E9PWQ3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a3E9PWQ3 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Col6a3E9PWQ3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a3E9PWQ3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a3E9PWQ3 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Col6a3E9PWQ3 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a3E9PWQ3 Gm43133-201ENSMUST00000197472 463 ntBASIC14.73□□□□□ -0.05
Col6a3E9PWQ3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.73□□□□□ -0.05
Col6a3E9PWQ3 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Col6a3E9PWQ3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a3E9PWQ3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a3E9PWQ3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a3E9PWQ3 Gm7467-201ENSMUST00000185173 652 ntBASIC14.73□□□□□ -0.05
Col6a3E9PWQ3 Gm43378-201ENSMUST00000199336 582 ntBASIC14.73□□□□□ -0.05
Col6a3E9PWQ3 Gm42997-202ENSMUST00000200321 985 ntBASIC14.73□□□□□ -0.05
Col6a3E9PWQ3 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC14.73□□□□□ -0.05
Col6a3E9PWQ3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a3E9PWQ3 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a3E9PWQ3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a3E9PWQ3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a3E9PWQ3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a3E9PWQ3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.73□□□□□ -0.05
Col6a3E9PWQ3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a3E9PWQ3 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a3E9PWQ3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Gm6015-201ENSMUST00000217493 1586 ntBASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Olfr284-202ENSMUST00000206647 966 ntBASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Gm14381-201ENSMUST00000122105 414 ntBASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Gm44545-201ENSMUST00000208262 746 ntBASIC14.72□□□□□ -0.05
Col6a3E9PWQ3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a3E9PWQ3 Dancr-204ENSMUST00000132389 2347 ntBASIC14.71□□□□□ -0.05
Col6a3E9PWQ3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Col6a3E9PWQ3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a3E9PWQ3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a3E9PWQ3 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a3E9PWQ3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Col6a3E9PWQ3 Gm24255-201ENSMUST00000104481 128 ntBASIC14.71□□□□□ -0.05
Col6a3E9PWQ3 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a3E9PWQ3 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.71□□□□□ -0.05
Col6a3E9PWQ3 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a3E9PWQ3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Col6a3E9PWQ3 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.71□□□□□ -0.05
Col6a3E9PWQ3 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a3E9PWQ3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a3E9PWQ3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a3E9PWQ3 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a3E9PWQ3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.71□□□□□ -0.05
Col6a3E9PWQ3 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a3E9PWQ3 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.71□□□□□ -0.05
Col6a3E9PWQ3 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Col6a3E9PWQ3 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.71□□□□□ -0.05
Col6a3E9PWQ3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col6a3E9PWQ3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col6a3E9PWQ3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Col6a3E9PWQ3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col6a3E9PWQ3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col6a3E9PWQ3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Gm10156-201ENSMUST00000122364 462 ntBASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Gm15429-201ENSMUST00000151268 798 ntBASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.7□□□□□ -0.06
Col6a3E9PWQ3 AC140293.1-201ENSMUST00000225626 1247 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms