Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hfm1D3Z4R1 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hfm1D3Z4R1 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC20.73■□□□□ 0.91
Hfm1D3Z4R1 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hfm1D3Z4R1 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hfm1D3Z4R1 Gm5356-201ENSMUST00000093326 615 ntBASIC20.73■□□□□ 0.91
Hfm1D3Z4R1 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Hfm1D3Z4R1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hfm1D3Z4R1 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Hfm1D3Z4R1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hfm1D3Z4R1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hfm1D3Z4R1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Hfm1D3Z4R1 Gm9200-201ENSMUST00000118513 1354 ntBASIC20.73■□□□□ 0.91
Hfm1D3Z4R1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hfm1D3Z4R1 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hfm1D3Z4R1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Hfm1D3Z4R1 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hfm1D3Z4R1 Gm14452-201ENSMUST00000118680 1632 ntBASIC20.72■□□□□ 0.91
Hfm1D3Z4R1 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hfm1D3Z4R1 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hfm1D3Z4R1 Gm5279-201ENSMUST00000199575 745 ntBASIC20.72■□□□□ 0.91
Hfm1D3Z4R1 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC20.72■□□□□ 0.91
Hfm1D3Z4R1 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hfm1D3Z4R1 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hfm1D3Z4R1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hfm1D3Z4R1 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hfm1D3Z4R1 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Hfm1D3Z4R1 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.72■□□□□ 0.91
Hfm1D3Z4R1 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hfm1D3Z4R1 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hfm1D3Z4R1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hfm1D3Z4R1 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hfm1D3Z4R1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hfm1D3Z4R1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Hfm1D3Z4R1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hfm1D3Z4R1 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC20.71■□□□□ 0.91
Hfm1D3Z4R1 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hfm1D3Z4R1 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC20.71■□□□□ 0.91
Hfm1D3Z4R1 Gm9726-201ENSMUST00000180321 678 ntBASIC20.71■□□□□ 0.91
Hfm1D3Z4R1 Gm27892-201ENSMUST00000185017 106 ntBASIC20.71■□□□□ 0.91
Hfm1D3Z4R1 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC20.71■□□□□ 0.91
Hfm1D3Z4R1 AC121598.1-201ENSMUST00000228224 1019 ntBASIC20.71■□□□□ 0.91
Hfm1D3Z4R1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Hfm1D3Z4R1 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Hfm1D3Z4R1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Hfm1D3Z4R1 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Hfm1D3Z4R1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Hfm1D3Z4R1 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Hfm1D3Z4R1 Gm12957-201ENSMUST00000117835 377 ntBASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 AC153872.1-201ENSMUST00000199539 128 ntBASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 Gm5912-201ENSMUST00000122282 1438 ntBASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 Dancr-204ENSMUST00000132389 2347 ntBASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 Gm7067-201ENSMUST00000207698 1249 ntBASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Hfm1D3Z4R1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hfm1D3Z4R1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hfm1D3Z4R1 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hfm1D3Z4R1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hfm1D3Z4R1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hfm1D3Z4R1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Hfm1D3Z4R1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hfm1D3Z4R1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hfm1D3Z4R1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hfm1D3Z4R1 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hfm1D3Z4R1 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hfm1D3Z4R1 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC20.69■□□□□ 0.9
Hfm1D3Z4R1 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Hfm1D3Z4R1 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hfm1D3Z4R1 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC20.69■□□□□ 0.9
Hfm1D3Z4R1 Gm43195-201ENSMUST00000200614 2332 ntBASIC20.69■□□□□ 0.9
Hfm1D3Z4R1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC20.69■□□□□ 0.9
Hfm1D3Z4R1 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hfm1D3Z4R1 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hfm1D3Z4R1 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Hfm1D3Z4R1 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Hfm1D3Z4R1 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Hfm1D3Z4R1 AC166574.6-201ENSMUST00000227889 1806 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms