Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccnb1ip1D3Z3K2 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.57□□□□□ -0.24
Ccnb1ip1D3Z3K2 Gm15378-201ENSMUST00000121894 207 ntBASIC13.57□□□□□ -0.24
Ccnb1ip1D3Z3K2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.57□□□□□ -0.24
Ccnb1ip1D3Z3K2 Timm23-208ENSMUST00000226683 750 ntBASIC13.57□□□□□ -0.24
Ccnb1ip1D3Z3K2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ccnb1ip1D3Z3K2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Ccnb1ip1D3Z3K2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ccnb1ip1D3Z3K2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ccnb1ip1D3Z3K2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccnb1ip1D3Z3K2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccnb1ip1D3Z3K2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccnb1ip1D3Z3K2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.57□□□□□ -0.24
Ccnb1ip1D3Z3K2 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccnb1ip1D3Z3K2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccnb1ip1D3Z3K2 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Matn2-206ENSMUST00000228570 2798 ntBASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccnb1ip1D3Z3K2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Gm12933-201ENSMUST00000120203 872 ntBASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Gm44430-201ENSMUST00000203376 995 ntBASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccnb1ip1D3Z3K2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccnb1ip1D3Z3K2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccnb1ip1D3Z3K2 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccnb1ip1D3Z3K2 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccnb1ip1D3Z3K2 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.54□□□□□ -0.24
Ccnb1ip1D3Z3K2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccnb1ip1D3Z3K2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccnb1ip1D3Z3K2 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccnb1ip1D3Z3K2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccnb1ip1D3Z3K2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccnb1ip1D3Z3K2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccnb1ip1D3Z3K2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccnb1ip1D3Z3K2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccnb1ip1D3Z3K2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.54□□□□□ -0.24
Ccnb1ip1D3Z3K2 Gm10052-201ENSMUST00000168019 960 ntBASIC13.54□□□□□ -0.24
Ccnb1ip1D3Z3K2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccnb1ip1D3Z3K2 Gm26571-201ENSMUST00000181399 666 ntBASIC13.54□□□□□ -0.24
Ccnb1ip1D3Z3K2 Gm42569-201ENSMUST00000200539 472 ntBASIC13.54□□□□□ -0.24
Ccnb1ip1D3Z3K2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.54□□□□□ -0.24
Ccnb1ip1D3Z3K2 AC160980.1-201ENSMUST00000224136 970 ntBASIC13.54□□□□□ -0.24
Ccnb1ip1D3Z3K2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccnb1ip1D3Z3K2 Gm7729-201ENSMUST00000050143 801 ntBASIC13.54□□□□□ -0.24
Ccnb1ip1D3Z3K2 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms