Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim30cD3YVI9 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trim30cD3YVI9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Trim30cD3YVI9 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Trim30cD3YVI9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trim30cD3YVI9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim30cD3YVI9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Trim30cD3YVI9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.4■□□□□ 0.22
Trim30cD3YVI9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim30cD3YVI9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.4■□□□□ 0.22
Trim30cD3YVI9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.4■□□□□ 0.22
Trim30cD3YVI9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trim30cD3YVI9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trim30cD3YVI9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim30cD3YVI9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim30cD3YVI9 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim30cD3YVI9 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Trim30cD3YVI9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim30cD3YVI9 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim30cD3YVI9 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim30cD3YVI9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim30cD3YVI9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim30cD3YVI9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trim30cD3YVI9 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Trim30cD3YVI9 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Trim30cD3YVI9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim30cD3YVI9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim30cD3YVI9 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim30cD3YVI9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Trim30cD3YVI9 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim30cD3YVI9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim30cD3YVI9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim30cD3YVI9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim30cD3YVI9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim30cD3YVI9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
Trim30cD3YVI9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.39■□□□□ 0.21
Trim30cD3YVI9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trim30cD3YVI9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim30cD3YVI9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim30cD3YVI9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.39■□□□□ 0.21
Trim30cD3YVI9 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim30cD3YVI9 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim30cD3YVI9 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.39■□□□□ 0.21
Trim30cD3YVI9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trim30cD3YVI9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim30cD3YVI9 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim30cD3YVI9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim30cD3YVI9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC16.39■□□□□ 0.21
Trim30cD3YVI9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim30cD3YVI9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trim30cD3YVI9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trim30cD3YVI9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim30cD3YVI9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim30cD3YVI9 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim30cD3YVI9 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim30cD3YVI9 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.38■□□□□ 0.21
Trim30cD3YVI9 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim30cD3YVI9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim30cD3YVI9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim30cD3YVI9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim30cD3YVI9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim30cD3YVI9 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.38■□□□□ 0.21
Trim30cD3YVI9 Gm25990-201ENSMUST00000102440 86 ntBASIC16.38■□□□□ 0.21
Trim30cD3YVI9 Gm6257-201ENSMUST00000163864 910 ntBASIC16.38■□□□□ 0.21
Trim30cD3YVI9 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim30cD3YVI9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.38■□□□□ 0.21
Trim30cD3YVI9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.38■□□□□ 0.21
Trim30cD3YVI9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.38■□□□□ 0.21
Trim30cD3YVI9 Gm18622-201ENSMUST00000219361 595 ntBASIC16.38■□□□□ 0.21
Trim30cD3YVI9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim30cD3YVI9 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trim30cD3YVI9 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim30cD3YVI9 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.38■□□□□ 0.21
Trim30cD3YVI9 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim30cD3YVI9 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trim30cD3YVI9 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Trim30cD3YVI9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim30cD3YVI9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trim30cD3YVI9 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Gm11780-201ENSMUST00000136880 516 ntBASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.37■□□□□ 0.21
Trim30cD3YVI9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms