Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Mir449b-201ENSMUST00000104833 80 ntBASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Mir6977-201ENSMUST00000184960 64 ntBASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Gm43125-201ENSMUST00000201724 730 ntBASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Gm19164-201ENSMUST00000210667 640 ntBASIC16.06■□□□□ 0.16
Sh2d4bA6X942 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Sh2d4bA6X942 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2d4bA6X942 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2d4bA6X942 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2d4bA6X942 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2d4bA6X942 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Sh2d4bA6X942 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Sh2d4bA6X942 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2d4bA6X942 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2d4bA6X942 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.05■□□□□ 0.16
Sh2d4bA6X942 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Sh2d4bA6X942 Gm23547-201ENSMUST00000158210 271 ntBASIC16.05■□□□□ 0.16
Sh2d4bA6X942 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2d4bA6X942 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2d4bA6X942 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.05■□□□□ 0.16
Sh2d4bA6X942 Thap2-203ENSMUST00000218989 527 ntBASIC16.05■□□□□ 0.16
Sh2d4bA6X942 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.05■□□□□ 0.16
Sh2d4bA6X942 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2d4bA6X942 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2d4bA6X942 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2d4bA6X942 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2d4bA6X942 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2d4bA6X942 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2d4bA6X942 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2d4bA6X942 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2d4bA6X942 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Sh2d4bA6X942 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2d4bA6X942 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2d4bA6X942 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sh2d4bA6X942 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2d4bA6X942 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2d4bA6X942 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2d4bA6X942 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2d4bA6X942 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2d4bA6X942 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Sh2d4bA6X942 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2d4bA6X942 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Sh2d4bA6X942 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Sh2d4bA6X942 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2d4bA6X942 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.04■□□□□ 0.16
Sh2d4bA6X942 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.04■□□□□ 0.16
Sh2d4bA6X942 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2d4bA6X942 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Sh2d4bA6X942 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2d4bA6X942 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2d4bA6X942 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2d4bA6X942 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.04■□□□□ 0.16
Sh2d4bA6X942 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Sh2d4bA6X942 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2d4bA6X942 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2d4bA6X942 Prob1-201ENSMUST00000097619 3021 ntBASIC16.04■□□□□ 0.16
Sh2d4bA6X942 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2d4bA6X942 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2d4bA6X942 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Sh2d4bA6X942 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Sh2d4bA6X942 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh2d4bA6X942 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh2d4bA6X942 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sh2d4bA6X942 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.03■□□□□ 0.16
Sh2d4bA6X942 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh2d4bA6X942 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh2d4bA6X942 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh2d4bA6X942 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh2d4bA6X942 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh2d4bA6X942 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Sh2d4bA6X942 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh2d4bA6X942 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Sh2d4bA6X942 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Sh2d4bA6X942 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Sh2d4bA6X942 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Sh2d4bA6X942 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms