Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Gm12008-201ENSMUST00000117791 755 ntBASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Gm12644-201ENSMUST00000119935 606 ntBASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Gm13836-201ENSMUST00000121159 501 ntBASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Gm6296-201ENSMUST00000222599 943 ntBASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav12-1A0N8R1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12-1A0N8R1 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.52□□□□□ -0.4
Trav12-1A0N8R1 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12-1A0N8R1 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12-1A0N8R1 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12-1A0N8R1 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Trav12-1A0N8R1 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12-1A0N8R1 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12-1A0N8R1 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12-1A0N8R1 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav12-1A0N8R1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-1A0N8R1 Gm33142-201ENSMUST00000193913 867 ntBASIC12.52□□□□□ -0.41
Trav12-1A0N8R1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav12-1A0N8R1 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-1A0N8R1 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-1A0N8R1 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav12-1A0N8R1 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-1A0N8R1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-1A0N8R1 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav12-1A0N8R1 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-1A0N8R1 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-1A0N8R1 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav12-1A0N8R1 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-1A0N8R1 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav12-1A0N8R1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-1A0N8R1 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-1A0N8R1 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-1A0N8R1 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-1A0N8R1 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-1A0N8R1 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-1A0N8R1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav12-1A0N8R1 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav12-1A0N8R1 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms