Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Gm28729A0A1B0GSW2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Gm15487-201ENSMUST00000122373 465 ntBASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Gm23547-201ENSMUST00000158210 271 ntBASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Gm28729A0A1B0GSW2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28729A0A1B0GSW2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28729A0A1B0GSW2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28729A0A1B0GSW2 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.54□□□□□ -0.08
Gm28729A0A1B0GSW2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28729A0A1B0GSW2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Gm28729A0A1B0GSW2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28729A0A1B0GSW2 Mir7684-201ENSMUST00000183858 60 ntBASIC14.54□□□□□ -0.08
Gm28729A0A1B0GSW2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Gm28729A0A1B0GSW2 Gm7775-201ENSMUST00000218871 853 ntBASIC14.54□□□□□ -0.08
Gm28729A0A1B0GSW2 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28729A0A1B0GSW2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
Gm28729A0A1B0GSW2 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28729A0A1B0GSW2 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28729A0A1B0GSW2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28729A0A1B0GSW2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Gm28729A0A1B0GSW2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28729A0A1B0GSW2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28729A0A1B0GSW2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28729A0A1B0GSW2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28729A0A1B0GSW2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28729A0A1B0GSW2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm28729A0A1B0GSW2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28729A0A1B0GSW2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28729A0A1B0GSW2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28729A0A1B0GSW2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28729A0A1B0GSW2 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28729A0A1B0GSW2 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.53□□□□□ -0.08
Gm28729A0A1B0GSW2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Gm28729A0A1B0GSW2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28729A0A1B0GSW2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28729A0A1B0GSW2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm28729A0A1B0GSW2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.53□□□□□ -0.08
Gm28729A0A1B0GSW2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms