Protein–RNA interactions for Protein: A0A0U1RP08

1700028J19Rik, RIKEN cDNA 1700028J19 gene (Fragment), mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700028J19RikA0A0U1RP08 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Gm10819-201ENSMUST00000099988 561 ntBASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
1700028J19RikA0A0U1RP08 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Gm11452-201ENSMUST00000122376 690 ntBASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Gm10060-201ENSMUST00000212002 111 ntBASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 AV026068-213ENSMUST00000223675 1171 ntBASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
1700028J19RikA0A0U1RP08 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Gm12134-201ENSMUST00000122109 520 ntBASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Mir8098-201ENSMUST00000184011 137 ntBASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
1700028J19RikA0A0U1RP08 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms