Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Trbv3A0A0A6YYE2 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trbv3A0A0A6YYE2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Gm18101-201ENSMUST00000215769 548 ntBASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv3A0A0A6YYE2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.53□□□□□ -0.56
Trbv3A0A0A6YYE2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms