Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbc1A0A0A6YWV4 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbc1A0A0A6YWV4 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbc1A0A0A6YWV4 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbc1A0A0A6YWV4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trbc1A0A0A6YWV4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trbc1A0A0A6YWV4 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.79□□□□□ -0.2
Trbc1A0A0A6YWV4 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbc1A0A0A6YWV4 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trbc1A0A0A6YWV4 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbc1A0A0A6YWV4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbc1A0A0A6YWV4 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbc1A0A0A6YWV4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trbc1A0A0A6YWV4 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trbc1A0A0A6YWV4 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.79□□□□□ -0.2
Trbc1A0A0A6YWV4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trbc1A0A0A6YWV4 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.79□□□□□ -0.2
Trbc1A0A0A6YWV4 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Trbc1A0A0A6YWV4 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbc1A0A0A6YWV4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trbc1A0A0A6YWV4 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbc1A0A0A6YWV4 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trbc1A0A0A6YWV4 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trbc1A0A0A6YWV4 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Gm12260-201ENSMUST00000122447 411 ntBASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Gm8000-201ENSMUST00000188378 592 ntBASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trbc1A0A0A6YWV4 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trbc1A0A0A6YWV4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trbc1A0A0A6YWV4 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trbc1A0A0A6YWV4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trbc1A0A0A6YWV4 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.77□□□□□ -0.2
Trbc1A0A0A6YWV4 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Gm11779-201ENSMUST00000118541 368 ntBASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Gm15467-201ENSMUST00000120582 445 ntBASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.77□□□□□ -0.21
Trbc1A0A0A6YWV4 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trbc1A0A0A6YWV4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms