Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm13312-201ENSMUST00000119631 718 ntBASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 AC127349.1-201ENSMUST00000224590 266 ntBASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trav13-4-dv7A0A075B6C2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm38318-201ENSMUST00000195769 1706 ntBASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm15794-201ENSMUST00000120182 631 ntBASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm19164-201ENSMUST00000210667 640 ntBASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Trav13-4-dv7A0A075B6C2 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms