Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav6-4A0A075B6B4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Gm6443-201ENSMUST00000203599 874 ntBASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Gm5364-201ENSMUST00000216789 889 ntBASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Trav6-4A0A075B6B4 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav6-4A0A075B6B4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms