Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav18A0A075B656 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.3□□□□□ -0.44
Trav18A0A075B656 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.3□□□□□ -0.44
Trav18A0A075B656 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav18A0A075B656 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav18A0A075B656 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.29□□□□□ -0.44
Trav18A0A075B656 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav18A0A075B656 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.29□□□□□ -0.44
Trav18A0A075B656 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Trav18A0A075B656 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.28□□□□□ -0.44
Trav18A0A075B656 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Gm12134-201ENSMUST00000122109 520 ntBASIC12.28□□□□□ -0.44
Trav18A0A075B656 Gm11780-201ENSMUST00000136880 516 ntBASIC12.28□□□□□ -0.44
Trav18A0A075B656 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Gm18669-201ENSMUST00000216049 778 ntBASIC12.28□□□□□ -0.44
Trav18A0A075B656 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav18A0A075B656 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms