Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-4A0A075B652 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-4A0A075B652 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav5-4A0A075B652 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-4A0A075B652 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-4A0A075B652 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-4A0A075B652 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-4A0A075B652 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-4A0A075B652 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.57□□□□□ -0.4
Trav5-4A0A075B652 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-4A0A075B652 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-4A0A075B652 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-4A0A075B652 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trav5-4A0A075B652 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.57□□□□□ -0.4
Trav5-4A0A075B652 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-4A0A075B652 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-4A0A075B652 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-4A0A075B652 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Gm21362-201ENSMUST00000194272 928 ntBASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav5-4A0A075B652 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav5-4A0A075B652 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Trav5-4A0A075B652 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms