Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Ankra2-208ENSMUST00000226100 1476 ntBASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Gm12527-201ENSMUST00000117967 564 ntBASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Gm13181-201ENSMUST00000120117 1069 ntBASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Gm9856-201ENSMUST00000217077 2578 ntBASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Gm15442-201ENSMUST00000117905 1527 ntBASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav8-1A0A075B641 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Gm44450-201ENSMUST00000199528 114 ntBASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav8-1A0A075B641 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Mir1199-201ENSMUST00000117015 119 ntBASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Gm16042-201ENSMUST00000204813 1247 ntBASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 AC175538.1-201ENSMUST00000225343 1269 ntBASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 AC156016.1-201ENSMUST00000227190 1035 ntBASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Gm14780-201ENSMUST00000118387 2737 ntBASIC10.75□□□□□ -0.69
Trav8-1A0A075B641 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms