Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav16d-dv11A0A075B617 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Gm23547-201ENSMUST00000158210 271 ntBASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Trav16d-dv11A0A075B617 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.64
Trav16d-dv11A0A075B617 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav16d-dv11A0A075B617 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Trav16d-dv11A0A075B617 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav16d-dv11A0A075B617 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.02□□□□□ -0.64
Trav16d-dv11A0A075B617 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav16d-dv11A0A075B617 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav16d-dv11A0A075B617 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav16d-dv11A0A075B617 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.02□□□□□ -0.64
Trav16d-dv11A0A075B617 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav16d-dv11A0A075B617 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 Gm715-201ENSMUST00000117865 831 ntBASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 Gm21814-202ENSMUST00000203277 873 ntBASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 AC135963.1-201ENSMUST00000211640 717 ntBASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 AC153881.1-201ENSMUST00000214448 284 ntBASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav16d-dv11A0A075B617 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav16d-dv11A0A075B617 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms