Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5-1A0A075B5Z7 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5-1A0A075B5Z7 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5-1A0A075B5Z7 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5-1A0A075B5Z7 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav5-1A0A075B5Z7 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Gm8396-201ENSMUST00000057361 823 ntBASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav5-1A0A075B5Z7 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Gm18889-201ENSMUST00000174284 929 ntBASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Gm20553-201ENSMUST00000204205 844 ntBASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trav5-1A0A075B5Z7 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.83□□□□□ -0.35
Trav5-1A0A075B5Z7 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav5-1A0A075B5Z7 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Trav5-1A0A075B5Z7 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.35
Trav5-1A0A075B5Z7 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav5-1A0A075B5Z7 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav5-1A0A075B5Z7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm6973-201ENSMUST00000117080 721 ntBASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm13365-201ENSMUST00000121188 973 ntBASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Mir6990-201ENSMUST00000183724 91 ntBASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav5-1A0A075B5Z7 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms