Protein–RNA interactions for Protein: V9GX31

Gm12728, Peptidyl-prolyl cis-trans isomerase, mousemouse

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12728V9GX31 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12728V9GX31 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Gm12728V9GX31 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12728V9GX31 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12728V9GX31 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12728V9GX31 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Gm12728V9GX31 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12728V9GX31 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Gm12728V9GX31 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12728V9GX31 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12728V9GX31 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12728V9GX31 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12728V9GX31 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12728V9GX31 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12728V9GX31 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12728V9GX31 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm12728V9GX31 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.07□□□□□ -0.48
Gm12728V9GX31 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12728V9GX31 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.07□□□□□ -0.48
Gm12728V9GX31 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.07□□□□□ -0.48
Gm12728V9GX31 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm12728V9GX31 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.06□□□□□ -0.48
Gm12728V9GX31 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Gm14722-201ENSMUST00000118943 689 ntBASIC12.06□□□□□ -0.48
Gm12728V9GX31 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.06□□□□□ -0.48
Gm12728V9GX31 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Gm27867-201ENSMUST00000184778 125 ntBASIC12.06□□□□□ -0.48
Gm12728V9GX31 Gm18622-201ENSMUST00000219361 595 ntBASIC12.06□□□□□ -0.48
Gm12728V9GX31 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm12728V9GX31 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12728V9GX31 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12728V9GX31 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12728V9GX31 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.05□□□□□ -0.48
Gm12728V9GX31 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Gm12728V9GX31 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm12728V9GX31 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms