Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
PdfS4R2K0 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.55□□□□□ -0.56
PdfS4R2K0 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
PdfS4R2K0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Gm11336-201ENSMUST00000118168 334 ntBASIC11.55□□□□□ -0.56
PdfS4R2K0 Gm29518-201ENSMUST00000190858 372 ntBASIC11.55□□□□□ -0.56
PdfS4R2K0 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
PdfS4R2K0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.55□□□□□ -0.56
PdfS4R2K0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
PdfS4R2K0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
PdfS4R2K0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.55□□□□□ -0.56
PdfS4R2K0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC11.55□□□□□ -0.56
PdfS4R2K0 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
PdfS4R2K0 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
PdfS4R2K0 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
PdfS4R2K0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdfS4R2K0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
PdfS4R2K0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdfS4R2K0 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdfS4R2K0 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdfS4R2K0 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.54□□□□□ -0.56
PdfS4R2K0 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
PdfS4R2K0 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.54□□□□□ -0.56
PdfS4R2K0 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdfS4R2K0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
PdfS4R2K0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdfS4R2K0 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
PdfS4R2K0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdfS4R2K0 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.54□□□□□ -0.56
PdfS4R2K0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdfS4R2K0 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
PdfS4R2K0 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdfS4R2K0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
PdfS4R2K0 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdfS4R2K0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.54□□□□□ -0.56
PdfS4R2K0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
PdfS4R2K0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
PdfS4R2K0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.54□□□□□ -0.56
PdfS4R2K0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
PdfS4R2K0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC11.54□□□□□ -0.56
PdfS4R2K0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdfS4R2K0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdfS4R2K0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdfS4R2K0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
PdfS4R2K0 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
PdfS4R2K0 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
PdfS4R2K0 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
PdfS4R2K0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdfS4R2K0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdfS4R2K0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdfS4R2K0 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdfS4R2K0 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
PdfS4R2K0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdfS4R2K0 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdfS4R2K0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.53□□□□□ -0.56
PdfS4R2K0 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
PdfS4R2K0 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PdfS4R2K0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms