Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Gm23936-201ENSMUST00000179354 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm22619-201ENSMUST00000179516 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm25255-201ENSMUST00000179579 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm24755-201ENSMUST00000179691 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm26506-201ENSMUST00000179692 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm25086-201ENSMUST00000179931 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm23243-201ENSMUST00000180047 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm24659-201ENSMUST00000180212 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm24169-201ENSMUST00000180244 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm23689-201ENSMUST00000180354 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm27359-201ENSMUST00000184153 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm27785-201ENSMUST00000184268 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm27466-201ENSMUST00000184396 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm27703-201ENSMUST00000184836 110 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm20949-201ENSMUST00000206478 952 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1h3Q9Z0Y9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Sybu-209ENSMUST00000228639 4113 ntBASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1h3Q9Z0Y9 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm25287-201ENSMUST00000103846 110 ntBASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm22918-201ENSMUST00000103855 110 ntBASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Asic1-205ENSMUST00000228185 1818 ntBASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1h3Q9Z0Y9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Nr1h3Q9Z0Y9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nr1h3Q9Z0Y9 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nr1h3Q9Z0Y9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Nr1h3Q9Z0Y9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Nr1h3Q9Z0Y9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms