Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ClcnkaQ9WUB7 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClcnkaQ9WUB7 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClcnkaQ9WUB7 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClcnkaQ9WUB7 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ClcnkaQ9WUB7 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
ClcnkaQ9WUB7 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClcnkaQ9WUB7 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClcnkaQ9WUB7 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClcnkaQ9WUB7 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClcnkaQ9WUB7 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ClcnkaQ9WUB7 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClcnkaQ9WUB7 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClcnkaQ9WUB7 Efs-202ENSMUST00000227037 2540 ntBASIC13.84□□□□□ -0.19
ClcnkaQ9WUB7 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ClcnkaQ9WUB7 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.84□□□□□ -0.19
ClcnkaQ9WUB7 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClcnkaQ9WUB7 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ClcnkaQ9WUB7 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClcnkaQ9WUB7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
ClcnkaQ9WUB7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClcnkaQ9WUB7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ClcnkaQ9WUB7 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ClcnkaQ9WUB7 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ClcnkaQ9WUB7 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
ClcnkaQ9WUB7 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
ClcnkaQ9WUB7 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.83□□□□□ -0.19
ClcnkaQ9WUB7 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
ClcnkaQ9WUB7 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
ClcnkaQ9WUB7 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClcnkaQ9WUB7 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClcnkaQ9WUB7 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClcnkaQ9WUB7 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.83□□□□□ -0.2
ClcnkaQ9WUB7 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClcnkaQ9WUB7 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClcnkaQ9WUB7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.83□□□□□ -0.2
ClcnkaQ9WUB7 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.83□□□□□ -0.2
ClcnkaQ9WUB7 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.83□□□□□ -0.2
ClcnkaQ9WUB7 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClcnkaQ9WUB7 Gm7787-201ENSMUST00000216858 688 ntBASIC13.83□□□□□ -0.2
ClcnkaQ9WUB7 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClcnkaQ9WUB7 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
ClcnkaQ9WUB7 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
ClcnkaQ9WUB7 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
ClcnkaQ9WUB7 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.83□□□□□ -0.2
ClcnkaQ9WUB7 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ClcnkaQ9WUB7 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClcnkaQ9WUB7 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ClcnkaQ9WUB7 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClcnkaQ9WUB7 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ClcnkaQ9WUB7 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 Gm10499-201ENSMUST00000174094 934 ntBASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 Gm2651-201ENSMUST00000203560 838 ntBASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 Gm45167-201ENSMUST00000208007 322 ntBASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ClcnkaQ9WUB7 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Gm13036-201ENSMUST00000117799 748 ntBASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Mir5126-201ENSMUST00000175513 77 ntBASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Gm15590-201ENSMUST00000078419 552 ntBASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ClcnkaQ9WUB7 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms