Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh17Q9R100 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cdh17Q9R100 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
Cdh17Q9R100 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh17Q9R100 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh17Q9R100 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh17Q9R100 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Cdh17Q9R100 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Cdh17Q9R100 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh17Q9R100 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh17Q9R100 Gm23547-201ENSMUST00000158210 271 ntBASIC14.64□□□□□ -0.07
Cdh17Q9R100 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.64□□□□□ -0.07
Cdh17Q9R100 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh17Q9R100 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.64□□□□□ -0.07
Cdh17Q9R100 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh17Q9R100 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.64□□□□□ -0.07
Cdh17Q9R100 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Cdh17Q9R100 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Cdh17Q9R100 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh17Q9R100 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh17Q9R100 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh17Q9R100 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Cdh17Q9R100 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.64□□□□□ -0.07
Cdh17Q9R100 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Cdh17Q9R100 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh17Q9R100 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh17Q9R100 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Cdh17Q9R100 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cdh17Q9R100 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.63□□□□□ -0.07
Cdh17Q9R100 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Gm7977-201ENSMUST00000193787 748 ntBASIC14.63□□□□□ -0.07
Cdh17Q9R100 Gm34391-201ENSMUST00000203706 907 ntBASIC14.63□□□□□ -0.07
Cdh17Q9R100 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh17Q9R100 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.63□□□□□ -0.07
Cdh17Q9R100 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.63□□□□□ -0.07
Cdh17Q9R100 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh17Q9R100 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh17Q9R100 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh17Q9R100 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.62□□□□□ -0.07
Cdh17Q9R100 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh17Q9R100 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh17Q9R100 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh17Q9R100 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh17Q9R100 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh17Q9R100 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh17Q9R100 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.62□□□□□ -0.07
Cdh17Q9R100 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh17Q9R100 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh17Q9R100 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh17Q9R100 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh17Q9R100 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh17Q9R100 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh17Q9R100 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cdh17Q9R100 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.62□□□□□ -0.07
Cdh17Q9R100 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh17Q9R100 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh17Q9R100 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh17Q9R100 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cdh17Q9R100 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.62□□□□□ -0.07
Cdh17Q9R100 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh17Q9R100 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh17Q9R100 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh17Q9R100 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh17Q9R100 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.61□□□□□ -0.07
Cdh17Q9R100 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh17Q9R100 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh17Q9R100 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh17Q9R100 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh17Q9R100 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh17Q9R100 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh17Q9R100 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.61□□□□□ -0.07
Cdh17Q9R100 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cdh17Q9R100 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14.61□□□□□ -0.07
Cdh17Q9R100 Gm43347-201ENSMUST00000200226 580 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms