Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Gm8344-201ENSMUST00000119813 856 ntBASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Gm17807-201ENSMUST00000186869 298 ntBASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chaf1aQ9QWF0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Gm15372-201ENSMUST00000120729 834 ntBASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chaf1aQ9QWF0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.8■□□□□ 0.28
Chaf1aQ9QWF0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Chaf1aQ9QWF0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Chaf1aQ9QWF0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1aQ9QWF0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.8■□□□□ 0.28
Chaf1aQ9QWF0 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1aQ9QWF0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1aQ9QWF0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1aQ9QWF0 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1aQ9QWF0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1aQ9QWF0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.8■□□□□ 0.28
Chaf1aQ9QWF0 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1aQ9QWF0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Chaf1aQ9QWF0 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.8■□□□□ 0.28
Chaf1aQ9QWF0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1aQ9QWF0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1aQ9QWF0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1aQ9QWF0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1aQ9QWF0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1aQ9QWF0 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.8■□□□□ 0.28
Chaf1aQ9QWF0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1aQ9QWF0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1aQ9QWF0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chaf1aQ9QWF0 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Chaf1aQ9QWF0 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Chaf1aQ9QWF0 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chaf1aQ9QWF0 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Chaf1aQ9QWF0 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
Chaf1aQ9QWF0 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chaf1aQ9QWF0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chaf1aQ9QWF0 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chaf1aQ9QWF0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chaf1aQ9QWF0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chaf1aQ9QWF0 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chaf1aQ9QWF0 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chaf1aQ9QWF0 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Chaf1aQ9QWF0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chaf1aQ9QWF0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Chaf1aQ9QWF0 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Chaf1aQ9QWF0 Gm14722-201ENSMUST00000118943 689 ntBASIC16.79■□□□□ 0.28
Chaf1aQ9QWF0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chaf1aQ9QWF0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.79■□□□□ 0.28
Chaf1aQ9QWF0 Gm8655-201ENSMUST00000221159 852 ntBASIC16.79■□□□□ 0.28
Chaf1aQ9QWF0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms