Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx5Q9JL61 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx5Q9JL61 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx5Q9JL61 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx5Q9JL61 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx5Q9JL61 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx5Q9JL61 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC15.84■□□□□ 0.13
Rfx5Q9JL61 Gm14822-201ENSMUST00000122247 291 ntBASIC15.84■□□□□ 0.13
Rfx5Q9JL61 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.84■□□□□ 0.13
Rfx5Q9JL61 Gm11025-201ENSMUST00000140773 466 ntBASIC15.84■□□□□ 0.13
Rfx5Q9JL61 Gm24513-201ENSMUST00000174964 138 ntBASIC15.84■□□□□ 0.13
Rfx5Q9JL61 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx5Q9JL61 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.84■□□□□ 0.13
Rfx5Q9JL61 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.84■□□□□ 0.13
Rfx5Q9JL61 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.84■□□□□ 0.13
Rfx5Q9JL61 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx5Q9JL61 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Rfx5Q9JL61 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Rfx5Q9JL61 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx5Q9JL61 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx5Q9JL61 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx5Q9JL61 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Rfx5Q9JL61 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx5Q9JL61 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx5Q9JL61 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx5Q9JL61 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.84■□□□□ 0.13
Rfx5Q9JL61 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rfx5Q9JL61 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rfx5Q9JL61 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rfx5Q9JL61 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Rfx5Q9JL61 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rfx5Q9JL61 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Rfx5Q9JL61 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rfx5Q9JL61 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx5Q9JL61 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx5Q9JL61 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx5Q9JL61 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx5Q9JL61 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.83■□□□□ 0.12
Rfx5Q9JL61 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.83■□□□□ 0.12
Rfx5Q9JL61 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.83■□□□□ 0.12
Rfx5Q9JL61 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.83■□□□□ 0.12
Rfx5Q9JL61 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx5Q9JL61 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx5Q9JL61 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Rfx5Q9JL61 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.83■□□□□ 0.12
Rfx5Q9JL61 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx5Q9JL61 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.83■□□□□ 0.12
Rfx5Q9JL61 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx5Q9JL61 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx5Q9JL61 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx5Q9JL61 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx5Q9JL61 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx5Q9JL61 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfx5Q9JL61 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.83■□□□□ 0.12
Rfx5Q9JL61 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.83■□□□□ 0.12
Rfx5Q9JL61 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Rfx5Q9JL61 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx5Q9JL61 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx5Q9JL61 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx5Q9JL61 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.82■□□□□ 0.12
Rfx5Q9JL61 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx5Q9JL61 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx5Q9JL61 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.82■□□□□ 0.12
Rfx5Q9JL61 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.82■□□□□ 0.12
Rfx5Q9JL61 Gm27702-201ENSMUST00000184512 56 ntBASIC15.82■□□□□ 0.12
Rfx5Q9JL61 Gm27397-201ENSMUST00000184997 107 ntBASIC15.82■□□□□ 0.12
Rfx5Q9JL61 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx5Q9JL61 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC15.82■□□□□ 0.12
Rfx5Q9JL61 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.82■□□□□ 0.12
Rfx5Q9JL61 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.82■□□□□ 0.12
Rfx5Q9JL61 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx5Q9JL61 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx5Q9JL61 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx5Q9JL61 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.82■□□□□ 0.12
Rfx5Q9JL61 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx5Q9JL61 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Rfx5Q9JL61 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rfx5Q9JL61 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx5Q9JL61 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx5Q9JL61 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx5Q9JL61 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.82■□□□□ 0.12
Rfx5Q9JL61 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx5Q9JL61 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx5Q9JL61 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfx5Q9JL61 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.81■□□□□ 0.12
Rfx5Q9JL61 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.81■□□□□ 0.12
Rfx5Q9JL61 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx5Q9JL61 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx5Q9JL61 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx5Q9JL61 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx5Q9JL61 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx5Q9JL61 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rfx5Q9JL61 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.81■□□□□ 0.12
Rfx5Q9JL61 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.81■□□□□ 0.12
Rfx5Q9JL61 Gm15483-201ENSMUST00000120338 456 ntBASIC15.81■□□□□ 0.12
Rfx5Q9JL61 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx5Q9JL61 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.81■□□□□ 0.12
Rfx5Q9JL61 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx5Q9JL61 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfx5Q9JL61 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms