Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl28Q9JIL2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.14□□□□□ -0.47
Ccl28Q9JIL2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.14□□□□□ -0.47
Ccl28Q9JIL2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ccl28Q9JIL2 Gm8318-201ENSMUST00000182954 872 ntBASIC12.14□□□□□ -0.47
Ccl28Q9JIL2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl28Q9JIL2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl28Q9JIL2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl28Q9JIL2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ccl28Q9JIL2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl28Q9JIL2 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Ccl28Q9JIL2 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl28Q9JIL2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl28Q9JIL2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl28Q9JIL2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccl28Q9JIL2 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ccl28Q9JIL2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl28Q9JIL2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl28Q9JIL2 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl28Q9JIL2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl28Q9JIL2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ccl28Q9JIL2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl28Q9JIL2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccl28Q9JIL2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl28Q9JIL2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ccl28Q9JIL2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccl28Q9JIL2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccl28Q9JIL2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms