Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ube4bQ9ES00 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ube4bQ9ES00 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ube4bQ9ES00 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ube4bQ9ES00 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Ube4bQ9ES00 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ube4bQ9ES00 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4bQ9ES00 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4bQ9ES00 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4bQ9ES00 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4bQ9ES00 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ube4bQ9ES00 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.46□□□□□ -0.09
Ube4bQ9ES00 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4bQ9ES00 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4bQ9ES00 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4bQ9ES00 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4bQ9ES00 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.46□□□□□ -0.09
Ube4bQ9ES00 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4bQ9ES00 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4bQ9ES00 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
Ube4bQ9ES00 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4bQ9ES00 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4bQ9ES00 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4bQ9ES00 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4bQ9ES00 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4bQ9ES00 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ube4bQ9ES00 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ube4bQ9ES00 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
Ube4bQ9ES00 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ube4bQ9ES00 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ube4bQ9ES00 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ube4bQ9ES00 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ube4bQ9ES00 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ube4bQ9ES00 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Gm10252-201ENSMUST00000209541 832 ntBASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ube4bQ9ES00 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube4bQ9ES00 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube4bQ9ES00 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube4bQ9ES00 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube4bQ9ES00 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube4bQ9ES00 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ube4bQ9ES00 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube4bQ9ES00 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.44□□□□□ -0.1
Ube4bQ9ES00 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ube4bQ9ES00 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube4bQ9ES00 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube4bQ9ES00 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube4bQ9ES00 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube4bQ9ES00 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ube4bQ9ES00 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ube4bQ9ES00 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube4bQ9ES00 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube4bQ9ES00 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube4bQ9ES00 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ube4bQ9ES00 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.44□□□□□ -0.1
Ube4bQ9ES00 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube4bQ9ES00 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube4bQ9ES00 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.44□□□□□ -0.1
Ube4bQ9ES00 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ube4bQ9ES00 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube4bQ9ES00 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ube4bQ9ES00 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ube4bQ9ES00 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.43□□□□□ -0.1
Ube4bQ9ES00 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ube4bQ9ES00 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ube4bQ9ES00 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ube4bQ9ES00 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ube4bQ9ES00 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ube4bQ9ES00 Gm11336-201ENSMUST00000118168 334 ntBASIC14.43□□□□□ -0.1
Ube4bQ9ES00 Gm15565-201ENSMUST00000118890 427 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms