Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps35Q9EQH3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps35Q9EQH3 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.05■□□□□ -0
Vps35Q9EQH3 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps35Q9EQH3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Vps35Q9EQH3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vps35Q9EQH3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Vps35Q9EQH3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps35Q9EQH3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Vps35Q9EQH3 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.04■□□□□ -0
Vps35Q9EQH3 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Vps35Q9EQH3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps35Q9EQH3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Vps35Q9EQH3 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.04■□□□□ -0
Vps35Q9EQH3 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Vps35Q9EQH3 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Vps35Q9EQH3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Vps35Q9EQH3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Vps35Q9EQH3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.04■□□□□ -0
Vps35Q9EQH3 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.04■□□□□ -0
Vps35Q9EQH3 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.04■□□□□ -0
Vps35Q9EQH3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.04■□□□□ -0
Vps35Q9EQH3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.04■□□□□ -0
Vps35Q9EQH3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps35Q9EQH3 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.04■□□□□ -0
Vps35Q9EQH3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps35Q9EQH3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps35Q9EQH3 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps35Q9EQH3 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps35Q9EQH3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps35Q9EQH3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Vps35Q9EQH3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.04■□□□□ -0
Vps35Q9EQH3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Vps35Q9EQH3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps35Q9EQH3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Vps35Q9EQH3 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Vps35Q9EQH3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps35Q9EQH3 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Vps35Q9EQH3 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.03■□□□□ -0
Vps35Q9EQH3 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Vps35Q9EQH3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps35Q9EQH3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps35Q9EQH3 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Vps35Q9EQH3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Vps35Q9EQH3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC15.03■□□□□ -0
Vps35Q9EQH3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.03■□□□□ -0
Vps35Q9EQH3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Vps35Q9EQH3 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.03■□□□□ -0
Vps35Q9EQH3 Gm10499-201ENSMUST00000174094 934 ntBASIC15.03■□□□□ -0
Vps35Q9EQH3 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.03■□□□□ -0
Vps35Q9EQH3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.03■□□□□ -0
Vps35Q9EQH3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps35Q9EQH3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Vps35Q9EQH3 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Vps35Q9EQH3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps35Q9EQH3 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps35Q9EQH3 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.03■□□□□ -0
Vps35Q9EQH3 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Vps35Q9EQH3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Vps35Q9EQH3 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Vps35Q9EQH3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.02■□□□□ -0
Vps35Q9EQH3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Vps35Q9EQH3 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Vps35Q9EQH3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps35Q9EQH3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Vps35Q9EQH3 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.02■□□□□ -0
Vps35Q9EQH3 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.02■□□□□ -0
Vps35Q9EQH3 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Vps35Q9EQH3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Vps35Q9EQH3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Vps35Q9EQH3 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps35Q9EQH3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.02■□□□□ -0
Vps35Q9EQH3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps35Q9EQH3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps35Q9EQH3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
Vps35Q9EQH3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.02■□□□□ -0
Vps35Q9EQH3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Vps35Q9EQH3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.02■□□□□ -0
Vps35Q9EQH3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Vps35Q9EQH3 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps35Q9EQH3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps35Q9EQH3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps35Q9EQH3 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Vps35Q9EQH3 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps35Q9EQH3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Vps35Q9EQH3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Vps35Q9EQH3 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps35Q9EQH3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps35Q9EQH3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps35Q9EQH3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps35Q9EQH3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Vps35Q9EQH3 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps35Q9EQH3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Vps35Q9EQH3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Vps35Q9EQH3 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Vps35Q9EQH3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms