Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Gm7889-201ENSMUST00000185591 958 ntBASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgn3Q9DCB1 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Celf4-206ENSMUST00000224553 1729 ntBASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Mir5130-201ENSMUST00000175160 84 ntBASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Gm43799-201ENSMUST00000201845 579 ntBASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Gm45058-201ENSMUST00000205810 766 ntBASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn3Q9DCB1 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn3Q9DCB1 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hmgn3Q9DCB1 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hmgn3Q9DCB1 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hmgn3Q9DCB1 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hmgn3Q9DCB1 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hmgn3Q9DCB1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hmgn3Q9DCB1 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgn3Q9DCB1 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgn3Q9DCB1 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgn3Q9DCB1 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgn3Q9DCB1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms