Protein–RNA interactions for Protein: Q9D9H2

Cldnd2, Claudin domain-containing protein 2, mousemouse

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd2Q9D9H2 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd2Q9D9H2 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cldnd2Q9D9H2 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd2Q9D9H2 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Cldnd2Q9D9H2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.01□□□□□ -0.33
Cldnd2Q9D9H2 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.01□□□□□ -0.33
Cldnd2Q9D9H2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cldnd2Q9D9H2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd2Q9D9H2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cldnd2Q9D9H2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd2Q9D9H2 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.01□□□□□ -0.33
Cldnd2Q9D9H2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd2Q9D9H2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd2Q9D9H2 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd2Q9D9H2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd2Q9D9H2 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd2Q9D9H2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd2Q9D9H2 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd2Q9D9H2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd2Q9D9H2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd2Q9D9H2 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd2Q9D9H2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldnd2Q9D9H2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Cldnd2Q9D9H2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Carlr-201ENSMUST00000181515 2574 ntBASIC13□□□□□ -0.33
Cldnd2Q9D9H2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Gm13559-201ENSMUST00000120476 863 ntBASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Gm3375-201ENSMUST00000203929 796 ntBASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldnd2Q9D9H2 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Gm13436-201ENSMUST00000120418 567 ntBASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldnd2Q9D9H2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldnd2Q9D9H2 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldnd2Q9D9H2 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cldnd2Q9D9H2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldnd2Q9D9H2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cldnd2Q9D9H2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldnd2Q9D9H2 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.98□□□□□ -0.33
Cldnd2Q9D9H2 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldnd2Q9D9H2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldnd2Q9D9H2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldnd2Q9D9H2 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldnd2Q9D9H2 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldnd2Q9D9H2 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldnd2Q9D9H2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cldnd2Q9D9H2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cldnd2Q9D9H2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Cldnd2Q9D9H2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms