Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC18.81■□□□□ 0.6
Chmp5Q9D7S9 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp5Q9D7S9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp5Q9D7S9 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp5Q9D7S9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp5Q9D7S9 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp5Q9D7S9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp5Q9D7S9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp5Q9D7S9 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp5Q9D7S9 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp5Q9D7S9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp5Q9D7S9 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Chmp5Q9D7S9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Chmp5Q9D7S9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp5Q9D7S9 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp5Q9D7S9 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Chmp5Q9D7S9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp5Q9D7S9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Chmp5Q9D7S9 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp5Q9D7S9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Chmp5Q9D7S9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp5Q9D7S9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Gm23547-201ENSMUST00000158210 271 ntBASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Gm43205-201ENSMUST00000198622 1968 ntBASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Chmp5Q9D7S9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp5Q9D7S9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp5Q9D7S9 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp5Q9D7S9 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp5Q9D7S9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp5Q9D7S9 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp5Q9D7S9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp5Q9D7S9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp5Q9D7S9 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp5Q9D7S9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp5Q9D7S9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.77■□□□□ 0.6
Chmp5Q9D7S9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp5Q9D7S9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp5Q9D7S9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.77■□□□□ 0.6
Chmp5Q9D7S9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms