Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Stag1Q9D3E6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Stag1Q9D3E6 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Stag1Q9D3E6 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.84■□□□□ 0.45
Stag1Q9D3E6 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.84■□□□□ 0.45
Stag1Q9D3E6 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Stag1Q9D3E6 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Stag1Q9D3E6 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Stag1Q9D3E6 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.84■□□□□ 0.45
Stag1Q9D3E6 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Stag1Q9D3E6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Stag1Q9D3E6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Stag1Q9D3E6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Stag1Q9D3E6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Stag1Q9D3E6 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Stag1Q9D3E6 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Stag1Q9D3E6 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Stag1Q9D3E6 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Stag1Q9D3E6 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Stag1Q9D3E6 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Stag1Q9D3E6 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Stag1Q9D3E6 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Stag1Q9D3E6 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Stag1Q9D3E6 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Stag1Q9D3E6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Stag1Q9D3E6 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.83■□□□□ 0.45
Stag1Q9D3E6 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Stag1Q9D3E6 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Stag1Q9D3E6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Stag1Q9D3E6 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Stag1Q9D3E6 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Stag1Q9D3E6 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Stag1Q9D3E6 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Stag1Q9D3E6 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.83■□□□□ 0.44
Stag1Q9D3E6 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Stag1Q9D3E6 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.83■□□□□ 0.44
Stag1Q9D3E6 Gm27618-201ENSMUST00000183671 60 ntBASIC17.83■□□□□ 0.44
Stag1Q9D3E6 Gm43767-201ENSMUST00000198933 381 ntBASIC17.83■□□□□ 0.44
Stag1Q9D3E6 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.83■□□□□ 0.44
Stag1Q9D3E6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Stag1Q9D3E6 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Stag1Q9D3E6 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Stag1Q9D3E6 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Stag1Q9D3E6 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Stag1Q9D3E6 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Stag1Q9D3E6 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Stag1Q9D3E6 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Stag1Q9D3E6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Stag1Q9D3E6 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Stag1Q9D3E6 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Stag1Q9D3E6 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Stag1Q9D3E6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Stag1Q9D3E6 Gm13517-201ENSMUST00000120782 1495 ntBASIC17.82■□□□□ 0.44
Stag1Q9D3E6 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Stag1Q9D3E6 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Stag1Q9D3E6 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.82■□□□□ 0.44
Stag1Q9D3E6 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
Stag1Q9D3E6 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC17.82■□□□□ 0.44
Stag1Q9D3E6 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Stag1Q9D3E6 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Stag1Q9D3E6 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Stag1Q9D3E6 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.82■□□□□ 0.44
Stag1Q9D3E6 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Stag1Q9D3E6 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Stag1Q9D3E6 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.82■□□□□ 0.44
Stag1Q9D3E6 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Stag1Q9D3E6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Stag1Q9D3E6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Stag1Q9D3E6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Stag1Q9D3E6 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Stag1Q9D3E6 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Stag1Q9D3E6 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Stag1Q9D3E6 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Stag1Q9D3E6 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Stag1Q9D3E6 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Stag1Q9D3E6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Stag1Q9D3E6 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.81■□□□□ 0.44
Stag1Q9D3E6 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms