Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Gm44430-201ENSMUST00000203376 995 ntBASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Vps33aQ9D2N9 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 Gm7370-201ENSMUST00000219471 767 ntBASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Vps33aQ9D2N9 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Vps33aQ9D2N9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33aQ9D2N9 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33aQ9D2N9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33aQ9D2N9 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33aQ9D2N9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33aQ9D2N9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33aQ9D2N9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Vps33aQ9D2N9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.89■□□□□ 0.13
Vps33aQ9D2N9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33aQ9D2N9 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33aQ9D2N9 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.89■□□□□ 0.13
Vps33aQ9D2N9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Vps33aQ9D2N9 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms