Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Mrpl55Q9CZ83 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC9.94□□□□□ -0.82
Mrpl55Q9CZ83 Gm45053-201ENSMUST00000206112 2499 ntBASIC9.94□□□□□ -0.82
Mrpl55Q9CZ83 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Mrpl55Q9CZ83 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Mrpl55Q9CZ83 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Mrpl55Q9CZ83 Gm7935-201ENSMUST00000100555 1278 ntBASIC9.94□□□□□ -0.82
Mrpl55Q9CZ83 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Mrpl55Q9CZ83 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Mrpl55Q9CZ83 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Mrpl55Q9CZ83 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC9.94□□□□□ -0.82
Mrpl55Q9CZ83 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC9.94□□□□□ -0.82
Mrpl55Q9CZ83 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Mrpl55Q9CZ83 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Mrpl55Q9CZ83 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Mrpl55Q9CZ83 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Mrpl55Q9CZ83 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Mrpl55Q9CZ83 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Mrpl55Q9CZ83 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Mrpl55Q9CZ83 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Mrpl55Q9CZ83 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Mrpl55Q9CZ83 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC9.94□□□□□ -0.82
Mrpl55Q9CZ83 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Mrpl55Q9CZ83 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Mrpl55Q9CZ83 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Mrpl55Q9CZ83 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Gm26684-202ENSMUST00000228229 8257 ntBASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Mir8098-201ENSMUST00000184011 137 ntBASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Mrpl55Q9CZ83 Gm37519-201ENSMUST00000191687 2210 ntBASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Gm16401-202ENSMUST00000197463 2074 ntBASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Gm13312-201ENSMUST00000119631 718 ntBASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Mrpl55Q9CZ83 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms