Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hcfc1r1Q9CYQ5 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Gm9013-201ENSMUST00000132939 882 ntBASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 AC158538.2-201ENSMUST00000225455 906 ntBASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Gm19863-201ENSMUST00000192480 2218 ntBASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Hcfc1r1Q9CYQ5 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Gm18622-201ENSMUST00000219361 595 ntBASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.99□□□□□ -0.33
Hcfc1r1Q9CYQ5 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 Gm15039-201ENSMUST00000118914 875 ntBASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 Gm11950-201ENSMUST00000121615 838 ntBASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 Gm9172-201ENSMUST00000212092 954 ntBASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Hcfc1r1Q9CYQ5 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms