Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nip7Q9CXK8 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC18.6■□□□□ 0.57
Nip7Q9CXK8 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC18.6■□□□□ 0.57
Nip7Q9CXK8 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nip7Q9CXK8 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nip7Q9CXK8 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC18.6■□□□□ 0.57
Nip7Q9CXK8 Shd-206ENSMUST00000225145 998 ntBASIC18.6■□□□□ 0.57
Nip7Q9CXK8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nip7Q9CXK8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.6■□□□□ 0.57
Nip7Q9CXK8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nip7Q9CXK8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nip7Q9CXK8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nip7Q9CXK8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nip7Q9CXK8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nip7Q9CXK8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nip7Q9CXK8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nip7Q9CXK8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nip7Q9CXK8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Nip7Q9CXK8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC18.58■□□□□ 0.57
Nip7Q9CXK8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nip7Q9CXK8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Nip7Q9CXK8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Nip7Q9CXK8 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC18.58■□□□□ 0.56
Nip7Q9CXK8 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nip7Q9CXK8 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Nip7Q9CXK8 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Nip7Q9CXK8 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC18.58■□□□□ 0.56
Nip7Q9CXK8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Nip7Q9CXK8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Nip7Q9CXK8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Nip7Q9CXK8 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nip7Q9CXK8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nip7Q9CXK8 Gm3365-201ENSMUST00000216296 1480 ntBASIC18.58■□□□□ 0.56
Nip7Q9CXK8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Nip7Q9CXK8 Tcf21-202ENSMUST00000218002 1788 ntBASIC18.58■□□□□ 0.56
Nip7Q9CXK8 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nip7Q9CXK8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nip7Q9CXK8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nip7Q9CXK8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nip7Q9CXK8 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nip7Q9CXK8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Nip7Q9CXK8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nip7Q9CXK8 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC18.57■□□□□ 0.56
Nip7Q9CXK8 Gm6473-201ENSMUST00000188572 1210 ntBASIC18.57■□□□□ 0.56
Nip7Q9CXK8 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC18.57■□□□□ 0.56
Nip7Q9CXK8 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nip7Q9CXK8 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nip7Q9CXK8 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nip7Q9CXK8 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nip7Q9CXK8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nip7Q9CXK8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nip7Q9CXK8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nip7Q9CXK8 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nip7Q9CXK8 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nip7Q9CXK8 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Nip7Q9CXK8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nip7Q9CXK8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Nip7Q9CXK8 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Nip7Q9CXK8 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Nip7Q9CXK8 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nip7Q9CXK8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Nip7Q9CXK8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nip7Q9CXK8 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.56■□□□□ 0.56
Nip7Q9CXK8 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Nip7Q9CXK8 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nip7Q9CXK8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.56■□□□□ 0.56
Nip7Q9CXK8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nip7Q9CXK8 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC18.56■□□□□ 0.56
Nip7Q9CXK8 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Nip7Q9CXK8 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Nip7Q9CXK8 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms