Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Chd1lQ9CXF7 Gm19164-201ENSMUST00000210667 640 ntBASIC16.98■□□□□ 0.31
Chd1lQ9CXF7 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.98■□□□□ 0.31
Chd1lQ9CXF7 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Chd1lQ9CXF7 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd1lQ9CXF7 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Chd1lQ9CXF7 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chd1lQ9CXF7 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
Chd1lQ9CXF7 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd1lQ9CXF7 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.98■□□□□ 0.31
Chd1lQ9CXF7 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.98■□□□□ 0.31
Chd1lQ9CXF7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Chd1lQ9CXF7 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Chd1lQ9CXF7 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd1lQ9CXF7 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Chd1lQ9CXF7 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Chd1lQ9CXF7 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Chd1lQ9CXF7 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
Chd1lQ9CXF7 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd1lQ9CXF7 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd1lQ9CXF7 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd1lQ9CXF7 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Chd1lQ9CXF7 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Chd1lQ9CXF7 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
Chd1lQ9CXF7 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd1lQ9CXF7 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd1lQ9CXF7 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd1lQ9CXF7 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chd1lQ9CXF7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd1lQ9CXF7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chd1lQ9CXF7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.96■□□□□ 0.31
Chd1lQ9CXF7 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.96■□□□□ 0.31
Chd1lQ9CXF7 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd1lQ9CXF7 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Chd1lQ9CXF7 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chd1lQ9CXF7 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Chd1lQ9CXF7 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1lQ9CXF7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1lQ9CXF7 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1lQ9CXF7 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1lQ9CXF7 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1lQ9CXF7 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1lQ9CXF7 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1lQ9CXF7 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Chd1lQ9CXF7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.95■□□□□ 0.3
Chd1lQ9CXF7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.95■□□□□ 0.3
Chd1lQ9CXF7 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1lQ9CXF7 Gm43056-201ENSMUST00000197865 2791 ntBASIC16.95■□□□□ 0.3
Chd1lQ9CXF7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1lQ9CXF7 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1lQ9CXF7 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1lQ9CXF7 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1lQ9CXF7 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1lQ9CXF7 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1lQ9CXF7 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chd1lQ9CXF7 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd1lQ9CXF7 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chd1lQ9CXF7 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd1lQ9CXF7 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Chd1lQ9CXF7 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chd1lQ9CXF7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.94■□□□□ 0.3
Chd1lQ9CXF7 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd1lQ9CXF7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd1lQ9CXF7 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Chd1lQ9CXF7 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms