Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.19□□□□□ -0.14
Otud1Q9CUB6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Otud1Q9CUB6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Gm27494-201ENSMUST00000184735 189 ntBASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Gm2272-201ENSMUST00000194903 582 ntBASIC14.18□□□□□ -0.14
Otud1Q9CUB6 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Otud1Q9CUB6 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Otud1Q9CUB6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Otud1Q9CUB6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Otud1Q9CUB6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Otud1Q9CUB6 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.17□□□□□ -0.14
Otud1Q9CUB6 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Otud1Q9CUB6 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Otud1Q9CUB6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Otud1Q9CUB6 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Otud1Q9CUB6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Otud1Q9CUB6 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Otud1Q9CUB6 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.17□□□□□ -0.14
Otud1Q9CUB6 Gm45612-201ENSMUST00000211320 160 ntBASIC14.17□□□□□ -0.14
Otud1Q9CUB6 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.17□□□□□ -0.14
Otud1Q9CUB6 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Otud1Q9CUB6 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Otud1Q9CUB6 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.17□□□□□ -0.14
Otud1Q9CUB6 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Otud1Q9CUB6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Otud1Q9CUB6 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Otud1Q9CUB6 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Otud1Q9CUB6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Otud1Q9CUB6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Otud1Q9CUB6 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.16□□□□□ -0.14
Otud1Q9CUB6 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Otud1Q9CUB6 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms