Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lsm7Q9CQQ8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lsm7Q9CQQ8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Gm18737-201ENSMUST00000173594 937 ntBASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Gm43125-201ENSMUST00000201724 730 ntBASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Lsm7Q9CQQ8 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Gm6973-201ENSMUST00000117080 721 ntBASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms