Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Rpl39lQ9CQD0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39lQ9CQD0 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39lQ9CQD0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Rpl39lQ9CQD0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC9.81□□□□□ -0.84
Rpl39lQ9CQD0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39lQ9CQD0 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39lQ9CQD0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Rpl39lQ9CQD0 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Rpl39lQ9CQD0 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39lQ9CQD0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39lQ9CQD0 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Rpl39lQ9CQD0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Rpl39lQ9CQD0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC9.81□□□□□ -0.84
Rpl39lQ9CQD0 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC9.8□□□□□ -0.84
Rpl39lQ9CQD0 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Gm23547-201ENSMUST00000158210 271 ntBASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Timm23-208ENSMUST00000226683 750 ntBASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Rpl39lQ9CQD0 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms