Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.71□□□□□ -0.05
Trim16Q99PP9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim16Q99PP9 Gm7461-201ENSMUST00000058918 827 ntBASIC14.71□□□□□ -0.05
Trim16Q99PP9 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim16Q99PP9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim16Q99PP9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim16Q99PP9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim16Q99PP9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim16Q99PP9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim16Q99PP9 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim16Q99PP9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim16Q99PP9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim16Q99PP9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim16Q99PP9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim16Q99PP9 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim16Q99PP9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim16Q99PP9 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.7□□□□□ -0.06
Trim16Q99PP9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim16Q99PP9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim16Q99PP9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim16Q99PP9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Trim16Q99PP9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim16Q99PP9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim16Q99PP9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim16Q99PP9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim16Q99PP9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.7□□□□□ -0.06
Trim16Q99PP9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.7□□□□□ -0.06
Trim16Q99PP9 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.7□□□□□ -0.06
Trim16Q99PP9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim16Q99PP9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.7□□□□□ -0.06
Trim16Q99PP9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim16Q99PP9 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim16Q99PP9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim16Q99PP9 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim16Q99PP9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trim16Q99PP9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim16Q99PP9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.7□□□□□ -0.06
Trim16Q99PP9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim16Q99PP9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim16Q99PP9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim16Q99PP9 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.69□□□□□ -0.06
Trim16Q99PP9 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim16Q99PP9 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim16Q99PP9 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim16Q99PP9 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim16Q99PP9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim16Q99PP9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim16Q99PP9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim16Q99PP9 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Trim16Q99PP9 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim16Q99PP9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim16Q99PP9 Gm15358-201ENSMUST00000119249 520 ntBASIC14.68□□□□□ -0.06
Trim16Q99PP9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Trim16Q99PP9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.68□□□□□ -0.06
Trim16Q99PP9 Gm7230-201ENSMUST00000173026 815 ntBASIC14.68□□□□□ -0.06
Trim16Q99PP9 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim16Q99PP9 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim16Q99PP9 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim16Q99PP9 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim16Q99PP9 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim16Q99PP9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim16Q99PP9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim16Q99PP9 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim16Q99PP9 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trim16Q99PP9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim16Q99PP9 Grk6-207ENSMUST00000225925 2769 ntBASIC14.68□□□□□ -0.06
Trim16Q99PP9 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim16Q99PP9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim16Q99PP9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trim16Q99PP9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim16Q99PP9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim16Q99PP9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms