Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm9182-201ENSMUST00000217829 639 ntBASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Mup-ps23-201ENSMUST00000118063 630 ntBASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Gm24196-201ENSMUST00000179161 110 ntBASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdh15Q99PJ1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh15Q99PJ1 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh15Q99PJ1 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.69■□□□□ 0.26
Pcdh15Q99PJ1 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh15Q99PJ1 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh15Q99PJ1 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Pcdh15Q99PJ1 Gm18054-201ENSMUST00000207539 555 ntBASIC16.69■□□□□ 0.26
Pcdh15Q99PJ1 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.69■□□□□ 0.26
Pcdh15Q99PJ1 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdh15Q99PJ1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdh15Q99PJ1 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh15Q99PJ1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh15Q99PJ1 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh15Q99PJ1 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh15Q99PJ1 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh15Q99PJ1 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh15Q99PJ1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdh15Q99PJ1 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh15Q99PJ1 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh15Q99PJ1 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdh15Q99PJ1 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 Gm8749-201ENSMUST00000117737 331 ntBASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 AC154171.1-201ENSMUST00000224610 643 ntBASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 Olfr582-201ENSMUST00000098212 960 ntBASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 Gm8652-201ENSMUST00000181363 964 ntBASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdh15Q99PJ1 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdh15Q99PJ1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pcdh15Q99PJ1 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh15Q99PJ1 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh15Q99PJ1 Trav4d-2-201ENSMUST00000120914 335 ntBASIC16.67■□□□□ 0.26
Pcdh15Q99PJ1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh15Q99PJ1 Gm17794-201ENSMUST00000220252 955 ntBASIC16.67■□□□□ 0.26
Pcdh15Q99PJ1 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Pcdh15Q99PJ1 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.67■□□□□ 0.26
Pcdh15Q99PJ1 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh15Q99PJ1 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh15Q99PJ1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh15Q99PJ1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh15Q99PJ1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh15Q99PJ1 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh15Q99PJ1 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh15Q99PJ1 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pcdh15Q99PJ1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdh15Q99PJ1 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdh15Q99PJ1 Gm14723-201ENSMUST00000118686 215 ntBASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Gm11524-201ENSMUST00000119349 807 ntBASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 AC125117.1-201ENSMUST00000228121 468 ntBASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdh15Q99PJ1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms