Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rtn4Q99P72 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn4Q99P72 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn4Q99P72 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn4Q99P72 Gm11873-201ENSMUST00000117877 1304 ntBASIC19.27■□□□□ 0.68
Rtn4Q99P72 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Rtn4Q99P72 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn4Q99P72 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.27■□□□□ 0.68
Rtn4Q99P72 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn4Q99P72 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn4Q99P72 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn4Q99P72 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn4Q99P72 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn4Q99P72 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn4Q99P72 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn4Q99P72 Gm11764-201ENSMUST00000120221 623 ntBASIC19.27■□□□□ 0.68
Rtn4Q99P72 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Rtn4Q99P72 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rtn4Q99P72 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Rtn4Q99P72 Gm44683-201ENSMUST00000209088 484 ntBASIC19.27■□□□□ 0.68
Rtn4Q99P72 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC19.27■□□□□ 0.68
Rtn4Q99P72 Gm19164-201ENSMUST00000210667 640 ntBASIC19.27■□□□□ 0.68
Rtn4Q99P72 Gm7787-201ENSMUST00000216858 688 ntBASIC19.27■□□□□ 0.68
Rtn4Q99P72 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn4Q99P72 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn4Q99P72 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Rtn4Q99P72 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn4Q99P72 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rtn4Q99P72 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.27■□□□□ 0.68
Rtn4Q99P72 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rtn4Q99P72 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC19.27■□□□□ 0.67
Rtn4Q99P72 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC19.27■□□□□ 0.67
Rtn4Q99P72 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rtn4Q99P72 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rtn4Q99P72 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4Q99P72 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4Q99P72 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rtn4Q99P72 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rtn4Q99P72 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4Q99P72 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4Q99P72 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4Q99P72 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4Q99P72 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4Q99P72 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4Q99P72 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
Rtn4Q99P72 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4Q99P72 Gm5253-201ENSMUST00000187104 1025 ntBASIC19.26■□□□□ 0.67
Rtn4Q99P72 Gm2756-201ENSMUST00000195851 400 ntBASIC19.26■□□□□ 0.67
Rtn4Q99P72 AC147366.1-201ENSMUST00000227671 852 ntBASIC19.26■□□□□ 0.67
Rtn4Q99P72 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4Q99P72 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4Q99P72 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4Q99P72 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4Q99P72 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Rtn4Q99P72 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4Q99P72 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4Q99P72 Sybu-209ENSMUST00000228639 4113 ntBASIC19.26■□□□□ 0.67
Rtn4Q99P72 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rtn4Q99P72 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4Q99P72 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.25■□□□□ 0.67
Rtn4Q99P72 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4Q99P72 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4Q99P72 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4Q99P72 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4Q99P72 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4Q99P72 Gm4913-201ENSMUST00000117075 1290 ntBASIC19.25■□□□□ 0.67
Rtn4Q99P72 H2af-ps-201ENSMUST00000119066 295 ntBASIC19.25■□□□□ 0.67
Rtn4Q99P72 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4Q99P72 Gm25911-201ENSMUST00000157621 56 ntBASIC19.25■□□□□ 0.67
Rtn4Q99P72 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC19.25■□□□□ 0.67
Rtn4Q99P72 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4Q99P72 Gm45484-201ENSMUST00000210310 1141 ntBASIC19.25■□□□□ 0.67
Rtn4Q99P72 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC19.25■□□□□ 0.67
Rtn4Q99P72 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4Q99P72 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4Q99P72 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4Q99P72 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4Q99P72 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rtn4Q99P72 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4Q99P72 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4Q99P72 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4Q99P72 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4Q99P72 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rtn4Q99P72 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4Q99P72 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4Q99P72 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4Q99P72 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4Q99P72 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4Q99P72 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4Q99P72 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC19.24■□□□□ 0.67
Rtn4Q99P72 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC19.24■□□□□ 0.67
Rtn4Q99P72 Gm8679-201ENSMUST00000210651 1036 ntBASIC19.24■□□□□ 0.67
Rtn4Q99P72 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4Q99P72 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4Q99P72 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4Q99P72 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4Q99P72 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rtn4Q99P72 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4Q99P72 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rtn4Q99P72 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms