Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Gm8097-201ENSMUST00000117903 829 ntBASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nkd1Q99MH6 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Gm12644-201ENSMUST00000119935 606 ntBASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Gm12895-201ENSMUST00000122214 226 ntBASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Gm27357-201ENSMUST00000183754 135 ntBASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.17□□□□□ -0.14
Nkd1Q99MH6 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nkd1Q99MH6 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nkd1Q99MH6 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.15□□□□□ -0.14
Nkd1Q99MH6 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms