Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scrt1Q99M85 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Gm27430-201ENSMUST00000184585 107 ntBASIC13.16□□□□□ -0.3
Scrt1Q99M85 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Gm44333-201ENSMUST00000197168 107 ntBASIC13.16□□□□□ -0.3
Scrt1Q99M85 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scrt1Q99M85 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scrt1Q99M85 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scrt1Q99M85 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.15□□□□□ -0.3
Scrt1Q99M85 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scrt1Q99M85 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.15□□□□□ -0.3
Scrt1Q99M85 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Gm27437-201ENSMUST00000183429 107 ntBASIC13.15□□□□□ -0.3
Scrt1Q99M85 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.15□□□□□ -0.3
Scrt1Q99M85 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Gm5779-201ENSMUST00000218467 910 ntBASIC13.15□□□□□ -0.3
Scrt1Q99M85 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scrt1Q99M85 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.15□□□□□ -0.3
Scrt1Q99M85 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scrt1Q99M85 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Scrt1Q99M85 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Scrt1Q99M85 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.15□□□□□ -0.31
Scrt1Q99M85 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Scrt1Q99M85 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.14□□□□□ -0.31
Scrt1Q99M85 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.14□□□□□ -0.31
Scrt1Q99M85 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.14□□□□□ -0.31
Scrt1Q99M85 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.14□□□□□ -0.31
Scrt1Q99M85 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Scrt1Q99M85 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms