Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Cstf3Q99LI7 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.53□□□□□ -0.08
Cstf3Q99LI7 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.53□□□□□ -0.08
Cstf3Q99LI7 Gm10499-201ENSMUST00000174094 934 ntBASIC14.53□□□□□ -0.08
Cstf3Q99LI7 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.53□□□□□ -0.08
Cstf3Q99LI7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.53□□□□□ -0.08
Cstf3Q99LI7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.53□□□□□ -0.08
Cstf3Q99LI7 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cstf3Q99LI7 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Cstf3Q99LI7 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cstf3Q99LI7 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cstf3Q99LI7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cstf3Q99LI7 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cstf3Q99LI7 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cstf3Q99LI7 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.52□□□□□ -0.08
Cstf3Q99LI7 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cstf3Q99LI7 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cstf3Q99LI7 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.52□□□□□ -0.08
Cstf3Q99LI7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cstf3Q99LI7 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.52□□□□□ -0.08
Cstf3Q99LI7 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cstf3Q99LI7 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cstf3Q99LI7 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.52□□□□□ -0.08
Cstf3Q99LI7 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.52□□□□□ -0.08
Cstf3Q99LI7 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cstf3Q99LI7 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cstf3Q99LI7 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cstf3Q99LI7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Cstf3Q99LI7 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cstf3Q99LI7 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cstf3Q99LI7 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.52□□□□□ -0.09
Cstf3Q99LI7 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.52□□□□□ -0.09
Cstf3Q99LI7 Gm37153-201ENSMUST00000193637 231 ntBASIC14.52□□□□□ -0.09
Cstf3Q99LI7 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cstf3Q99LI7 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.52□□□□□ -0.09
Cstf3Q99LI7 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cstf3Q99LI7 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.52□□□□□ -0.09
Cstf3Q99LI7 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.52□□□□□ -0.09
Cstf3Q99LI7 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cstf3Q99LI7 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cstf3Q99LI7 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Rps4l-201ENSMUST00000071745 943 ntBASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cstf3Q99LI7 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cstf3Q99LI7 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cstf3Q99LI7 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cstf3Q99LI7 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cstf3Q99LI7 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cstf3Q99LI7 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cstf3Q99LI7 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cstf3Q99LI7 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cstf3Q99LI7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.5□□□□□ -0.09
Cstf3Q99LI7 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cstf3Q99LI7 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cstf3Q99LI7 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cstf3Q99LI7 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cstf3Q99LI7 Gm7222-201ENSMUST00000117512 906 ntBASIC14.5□□□□□ -0.09
Cstf3Q99LI7 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.5□□□□□ -0.09
Cstf3Q99LI7 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Cstf3Q99LI7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cstf3Q99LI7 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.5□□□□□ -0.09
Cstf3Q99LI7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.5□□□□□ -0.09
Cstf3Q99LI7 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms