Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.69□□□□□ -0.22
Lims1Q99JW4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lims1Q99JW4 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.69□□□□□ -0.22
Lims1Q99JW4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lims1Q99JW4 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Lims1Q99JW4 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.68□□□□□ -0.22
Lims1Q99JW4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Lims1Q99JW4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.68□□□□□ -0.22
Lims1Q99JW4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Lims1Q99JW4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.68□□□□□ -0.22
Lims1Q99JW4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Lims1Q99JW4 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.67□□□□□ -0.22
Lims1Q99JW4 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lims1Q99JW4 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lims1Q99JW4 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lims1Q99JW4 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lims1Q99JW4 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.67□□□□□ -0.22
Lims1Q99JW4 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lims1Q99JW4 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lims1Q99JW4 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lims1Q99JW4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lims1Q99JW4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lims1Q99JW4 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lims1Q99JW4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lims1Q99JW4 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lims1Q99JW4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lims1Q99JW4 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.67□□□□□ -0.22
Lims1Q99JW4 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.67□□□□□ -0.22
Lims1Q99JW4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.67□□□□□ -0.22
Lims1Q99JW4 Gm7461-201ENSMUST00000058918 827 ntBASIC13.67□□□□□ -0.22
Lims1Q99JW4 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.67□□□□□ -0.22
Lims1Q99JW4 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.67□□□□□ -0.22
Lims1Q99JW4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lims1Q99JW4 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lims1Q99JW4 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.67□□□□□ -0.22
Lims1Q99JW4 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lims1Q99JW4 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lims1Q99JW4 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Lims1Q99JW4 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lims1Q99JW4 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lims1Q99JW4 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Lims1Q99JW4 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lims1Q99JW4 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lims1Q99JW4 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lims1Q99JW4 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lims1Q99JW4 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lims1Q99JW4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lims1Q99JW4 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lims1Q99JW4 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.66□□□□□ -0.22
Lims1Q99JW4 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lims1Q99JW4 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lims1Q99JW4 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lims1Q99JW4 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lims1Q99JW4 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lims1Q99JW4 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms